Genome Meta Information: Acidovorax ebreus RXF3_metabat.bin.1 (GCA_024711385.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_024711385.1 | ||
| HOMD Taxon-ID | HMT-209 | ||
| Species Name (in use by HOMD) | Acidovorax ebreus | ||
| Organism Name (as deposited) | HMT-209 Acidovorax ebreus RXF3_metabat.bin.1 | ||
| Strain or Isolate | RXF3_metabat.bin.1 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Diaphorobacter; s__Diaphorobacter nitroreducens |
||
| Sequencing Technology | Illumina NextSeq | ||
| Genome Coverage | 1383.0x | ||
| Contigs |
|
||
| Total Sequence Length | 3,536,044 (bp) | ||
| GC Percentage | 67.06 | ||
| MAG | yes | ||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/024/711/385/GCA_024711385.1_ASM2471138v1 | ||
| CDS | 3271 | ||
| Genes | 3407 | ||
| mRNA | 3407 | ||
| misc RNA | 87 | ||
| rRNA | 3 | ||
| tRNA | 45 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.98 % | ||
| CheckM Contamination | 1.55 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.93 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP Site] | ||
| Pangenomes (Beta) | No Pangenomes Available. | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2471138v1 |
| GenBank Assembly Accession | GCA_024711385.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_024711385.1 [NCBI] |
| BioSample | SAMN28990792 [NCBI] |
| BioProject | PRJNA848245 [NCBI] |
| Submitter | Colledge of Environmental Sciences and Engineering, Peking University |
| Submission Date | 2022-06-11T23:37:06.240 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JANJSX01 |
| NCBI TaxID | 1934310 |
| Isolation Source | river sediments grown in denitrifying medium in anaerobic bioreactor system |
| Geo Location | China: Beijing |
