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Genome Meta Information:
Acidovorax
ebreus
RC343_metabat.bin.48 (GCA_024709665.1)
| HOMD Genome-ID |
GCA_024709665.1
|
| HOMD Taxon-ID |
HMT-209
|
| Species Name (in use by HOMD) |
Acidovorax ebreus
|
| Organism Name (as deposited) |
HMT-209 Acidovorax ebreus RC343_metabat.bin.48
|
| Strain or Isolate |
RC343_metabat.bin.48
|
GTDB (V)
Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Diaphorobacter;
s__Diaphorobacter nitroreducens |
| Sequencing Technology |
Illumina NextSeq
|
| Genome Coverage |
27.6x
|
| Contigs |
Number of Contigs: 213
|
[Open
in Genome Viewer]
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Sequence]
[Linkout to
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|
|
| Total Sequence Length |
3,596,826 (bp) |
| GC Percentage |
67.17
|
| MAG |
yes
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/024/709/665/GCA_024709665.1_ASM2470966v1
|
| CDS |
3323
|
| Genes |
3408
|
| mRNA |
3408
|
| misc RNA |
41
|
| rRNA |
0
|
| tRNA |
43
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
%
|
| CheckM Completeness |
94.49 %
|
| CheckM Contamination |
5.77 %
|
| CheckM2 Completeness |
90.35 %
|
| CheckM2 Contamination |
3.98 %
|
| CRISPR-cas |
No Available
Data |
| Pangenomes (Beta) |
No Pangenomes Available.
|
| Genome Assembly Name |
ASM2470966v1
|
| GenBank Assembly Accession |
GCA_024709665.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_024709665.1
[NCBI]
|
| BioSample |
SAMN28993204
[NCBI]
|
| BioProject |
PRJNA848245
[NCBI]
|
| Submitter |
Colledge of Environmental Sciences and Engineering, Peking University
|
| Submission Date |
2022-06-12T06:57:06.396
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
JANJWH01
|
| NCBI TaxID |
1934310
|
| Isolation Source |
river sediments grown in denitrifying medium in anaerobic bioreactor system
|
| Geo Location |
China: Beijing
|
