Genome Meta Information: Streptococcus gordonii S21 (GCA_023109885.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_023109885.1 | ||
| HOMD Taxon-ID | HMT-622 | ||
| Species Name (in use by HOMD) | Streptococcus gordonii | ||
| Organism Name (as deposited) | HMT-622 Streptococcus gordonii S21 | ||
| Strain or Isolate | S21 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus gordonii |
||
| Sequencing Technology | Illumina NextSeq 500 | ||
| Genome Coverage | 240.0x | ||
| Contigs |
|
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| Total Sequence Length | 2,249,499 (bp) | ||
| GC Percentage | 40.35 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/023/109/885/GCA_023109885.1_ASM2310988v1 | ||
| CDS | 2144 | ||
| Genes | 2218 | ||
| mRNA | 2218 | ||
| misc RNA | 30 | ||
| rRNA | 2 | ||
| tRNA | 41 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.43 % | ||
| CheckM Completeness | 100 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 99.99 % | ||
| CheckM2 Contamination | 0.07 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2310988v1 |
| GenBank Assembly Accession | GCA_023109885.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_023109885.1 [NCBI] |
| BioSample | SAMN26876565 [NCBI] |
| BioProject | PRJNA817585 [NCBI] |
| Submitter | The University of Texas at Dallas |
| Submission Date | 2022-03-22T18:07:05.270 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | JALDUZ01 |
| NCBI TaxID | 1302 |
| Isolation Source | Endocarditis |
| Geo Location | USA: Texas |
