Genome Meta Information: Acidovorax ebreus LI3 (GCA_022807955.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_022807955.1 | ||
| HOMD Taxon-ID | HMT-209 | ||
| Species Name (in use by HOMD) | Acidovorax ebreus | ||
| Organism Name (as deposited) | HMT-209 Acidovorax ebreus LI3 | ||
| Strain or Isolate | LI3 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Diaphorobacter; s__Diaphorobacter nitroreducens |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 100.0x | ||
| Contigs |
|
||
| Total Sequence Length | 4,251,417 (bp) | ||
| GC Percentage | 66.42 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/807/955/GCA_022807955.1_ASM2280795v1 | ||
| CDS | 3895 | ||
| Genes | 4109 | ||
| mRNA | 4109 | ||
| misc RNA | 149 | ||
| rRNA | 9 | ||
| tRNA | 55 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.9 % | ||
| CheckM Contamination | 1.72 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.09 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP Site] | ||
| Pangenomes (Beta) | No Pangenomes Available. | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2280795v1 |
| GenBank Assembly Accession | GCA_022807955.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_022807955.1 [NCBI] |
| BioSample | SAMN26879455 [NCBI] |
| BioProject | PRJNA818792 [NCBI] |
| Submitter | South China Normal University |
| Submission Date | 2022-03-23T00:00:07.436 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 2952886 |
| Isolation Source | soil in South China Botanical Garden |
| Geo Location | China: South China Botanical G |
