Genome Meta Information: Aquamicrobium lusatiense NLF2-7 (GCA_022359935.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_022359935.1 | ||
| HOMD Taxon-ID | HMT-660 | ||
| Species Name (in use by HOMD) | Aquamicrobium lusatiense | ||
| Organism Name (as deposited) | HMT-660 Aquamicrobium lusatiense NLF2-7 | ||
| Strain or Isolate | NLF2-7 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Mesorhizobium; s__Mesorhizobium lusatiense |
||
| Sequencing Technology | PacBio Sequel; Illumina HiSeq | ||
| Genome Coverage | 162.0x | ||
| Contigs |
|
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| Total Sequence Length | 5,201,486 (bp) | ||
| GC Percentage | 62.28 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/359/935/GCA_022359935.1_ASM2235993v1 | ||
| CDS | 4932 | ||
| Genes | 5040 | ||
| mRNA | 5040 | ||
| misc RNA | 48 | ||
| rRNA | 6 | ||
| tRNA | 53 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.3 % | ||
| CheckM Contamination | 1.37 % | ||
| CheckM2 Completeness | 99.17 % | ||
| CheckM2 Contamination | 3.25 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP Site] | ||
| Pangenomes (Beta) | No Pangenomes Available. | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2235993v1 |
| GenBank Assembly Accession | GCA_022359935.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_022359935.1 [NCBI] |
| BioSample | SAMN25981959 [NCBI] |
| BioProject | PRJNA807442 [NCBI] |
| Submitter | Nakdonggang National Institute of Biological Resources (NNIBR) |
| Submission Date | 2022-02-15T23:29:03.310 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAKSED01 |
| NCBI TaxID | 2918753 |
| Isolation Source | Livestock Wastewater |
| Geo Location | South Korea: Nonsan |
