Back To Genome Table
Genome Meta Information:
Streptococcus
gordonii
DFI.4.19 (GCA_022136825.1)
| HOMD Genome-ID |
GCA_022136825.1
|
| HOMD Taxon-ID |
HMT-622
|
| Species Name (in use by HOMD) |
Streptococcus gordonii
|
| Organism Name (as deposited) |
HMT-622 Streptococcus gordonii DFI.4.19
|
| Strain or Isolate |
DFI.4.19
|
GTDB (V)
Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;
s__Streptococcus gordonii |
| Sequencing Technology |
Illumina MiSeq
|
| Genome Coverage |
100.0x
|
| Contigs |
Number of Contigs: 168
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
2,274,423 (bp) |
| GC Percentage |
40.18
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/136/825/GCA_022136825.1_NA
|
| CDS |
2123
|
| Genes |
2200
|
| mRNA |
2200
|
| misc RNA |
27
|
| rRNA |
6
|
| tRNA |
43
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
95.43 %
|
| CheckM Completeness |
100 %
|
| CheckM Contamination |
0.12 %
|
| CheckM2 Completeness |
100 %
|
| CheckM2 Contamination |
0.05 %
|
| CRISPR-cas |
1 Contig
[View]
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
NA
|
| GenBank Assembly Accession |
GCA_022136825.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_022136825.1
[NCBI]
|
| BioSample |
SAMN24725998
[NCBI]
|
| BioProject |
PRJNA792599
[NCBI]
|
| Submitter |
University of Chicago
|
| Submission Date |
2022-01-07T17:34:05.543
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
JAKNFA01
|
| NCBI TaxID |
1302
|
| Isolation Source |
human fecal sample
|
| Geo Location |
USA:Chicago
|
