Genome Meta Information: Streptococcus gordonii 10558 (GCA_019929985.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_019929985.1 | ||
| HOMD Taxon-ID | HMT-622 | ||
| Species Name (in use by HOMD) | Streptococcus gordonii | ||
| Organism Name (as deposited) | HMT-622 Streptococcus gordonii 10558 | ||
| Strain or Isolate | 10558 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus gordonii |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 70.0x | ||
| Contigs |
|
||
| Total Sequence Length | 2,165,874 (bp) | ||
| GC Percentage | 40.51 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/019/929/985/GCA_019929985.1_ASM1992998v1 | ||
| CDS | 2056 | ||
| Genes | 2146 | ||
| mRNA | 2146 | ||
| misc RNA | 46 | ||
| rRNA | 3 | ||
| tRNA | 40 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 100 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.15 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1992998v1 |
| GenBank Assembly Accession | GCA_019929985.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_019929985.1 [NCBI] |
| BioSample | SAMN20399907 [NCBI] |
| BioProject | PRJNA749742 [NCBI] |
| Submitter | Institute for Genome Sciences, University of Maryland, Baltimore |
| Submission Date | 2021-07-26T13:03:05.980 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAHZQN01 |
| NCBI TaxID | 1302 |
| Isolation Source | bacterial endocarditis |
| Geo Location | missing |
