Genome Meta Information: Streptococcus gordonii SK33 (GCA_019929745.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_019929745.1 | ||
| HOMD Taxon-ID | HMT-622 | ||
| Species Name (in use by HOMD) | Streptococcus gordonii | ||
| Organism Name (as deposited) | HMT-622 Streptococcus gordonii SK33 | ||
| Strain or Isolate | SK33 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus gordonii |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 61.0x | ||
| Contigs |
|
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| Total Sequence Length | 2,198,505 (bp) | ||
| GC Percentage | 40.45 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/019/929/745/GCA_019929745.1_ASM1992974v1 | ||
| CDS | 2092 | ||
| Genes | 2175 | ||
| mRNA | 2175 | ||
| misc RNA | 38 | ||
| rRNA | 4 | ||
| tRNA | 40 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.53 % | ||
| CheckM Completeness | 100 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 99.99 % | ||
| CheckM2 Contamination | 0.03 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1992974v1 |
| GenBank Assembly Accession | GCA_019929745.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_019929745.1 [NCBI] |
| BioSample | SAMN20399920 [NCBI] |
| BioProject | PRJNA749742 [NCBI] |
| Submitter | Institute for Genome Sciences, University of Maryland, Baltimore |
| Submission Date | 2021-07-26T13:03:06.147 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAHZQB01 |
| NCBI TaxID | 1302 |
| Isolation Source | oral cavity |
| Geo Location | missing |
