Genome Meta Information: Streptococcus gordonii SK186 (GCA_019929725.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_019929725.1 | ||
| HOMD Taxon-ID | HMT-622 | ||
| Species Name (in use by HOMD) | Streptococcus gordonii | ||
| Organism Name (as deposited) | HMT-622 Streptococcus gordonii SK186 | ||
| Strain or Isolate | SK186 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus gordonii |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 51.0x | ||
| Contigs |
|
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| Total Sequence Length | 2,205,158 (bp) | ||
| GC Percentage | 40.26 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/019/929/725/GCA_019929725.1_ASM1992972v1 | ||
| CDS | 2107 | ||
| Genes | 2179 | ||
| mRNA | 2179 | ||
| misc RNA | 28 | ||
| rRNA | 3 | ||
| tRNA | 40 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.42 % | ||
| CheckM Completeness | 100 % | ||
| CheckM Contamination | 0.37 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.03 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1992972v1 |
| GenBank Assembly Accession | GCA_019929725.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_019929725.1 [NCBI] |
| BioSample | SAMN20399919 [NCBI] |
| BioProject | PRJNA749742 [NCBI] |
| Submitter | Institute for Genome Sciences, University of Maryland, Baltimore |
| Submission Date | 2021-07-26T13:03:06.137 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAHZQC01 |
| NCBI TaxID | 1302 |
| Isolation Source | dental plaque |
| Geo Location | missing |
