Genome Meta Information: Streptococcus gordonii 14-4065 (GCA_019449375.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_019449375.1 | ||
| HOMD Taxon-ID | HMT-622 | ||
| Species Name (in use by HOMD) | Streptococcus gordonii | ||
| Organism Name (as deposited) | HMT-622 Streptococcus gordonii 14-4065 | ||
| Strain or Isolate | 14-4065 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus gordonii |
||
| Sequencing Technology | Illumina NextSeq | ||
| Genome Coverage | 179.0x | ||
| Contigs |
|
||
| Total Sequence Length | 2,249,747 (bp) | ||
| GC Percentage | 40.29 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/019/449/375/GCA_019449375.1_ASM1944937v1 | ||
| CDS | 2137 | ||
| Genes | 2216 | ||
| mRNA | 2216 | ||
| misc RNA | 32 | ||
| rRNA | 3 | ||
| tRNA | 43 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.85 % | ||
| CheckM Completeness | 100 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 99.99 % | ||
| CheckM2 Contamination | 0.05 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1944937v1 |
| GenBank Assembly Accession | GCA_019449375.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_019449375.1 [NCBI] |
| BioSample | SAMN19102748 [NCBI] |
| BioProject | PRJNA728738 [NCBI] |
| Submitter | University of Mississippi Medical Center |
| Submission Date | 2021-05-10T18:18:03.683 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAHZSL01 |
| NCBI TaxID | 1302 |
| Isolation Source | eye |
| Geo Location | USA |
