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Genome Meta Information:
Anaerovoracaceae [G1]
infirmum
HRGM_Genome_3787 (GCA_019416205.1)
| HOMD Genome-ID |
GCA_019416205.1
|
| HOMD Taxon-ID |
HMT-105
|
| Species Name (in use by HOMD) |
Anaerovoracaceae [G1] infirmum
|
| Organism Name (as deposited) |
HMT-105 Peptostreptococcaceae [G1 "Eubacterium"] infirmum HRGM_Genome_3787
|
| Strain or Isolate |
HRGM_Genome_3787
|
GTDB (V)
Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Peptostreptococcales;f__Anaerovoracaceae;g__Eubacterium_B;
s__Eubacterium_B infirmum |
| Sequencing Technology |
Illumina HiSeq
|
| Genome Coverage |
6.1x
|
| Contigs |
Number of Contigs: 269
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
1,264,423 (bp) |
| GC Percentage |
41.79
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/019/416/205/GCA_019416205.1_ASM1941620v1
|
| CDS |
1084
|
| Genes |
1114
|
| mRNA |
1114
|
| misc RNA |
22
|
| rRNA |
0
|
| tRNA |
7
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
%
|
| CheckM Completeness |
80.91 %
|
| CheckM Contamination |
0.02 %
|
| CheckM2 Completeness |
70.81 %
|
| CheckM2 Contamination |
2.27 %
|
| CRISPR-cas |
No Available
Data |
| Pangenomes (Beta) |
View in Anvi`o:
Peptostreptococcaceae_G1_Eubacterium__infirmum__HMT_105
(Interactive)
View SVG Image
|
| Genome Assembly Name |
ASM1941620v1
|
| GenBank Assembly Accession |
GCA_019416205.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
[NCBI]
|
| BioSample |
SAMN19225258
[NCBI]
|
| BioProject |
PRJNA730993
[NCBI]
|
| Submitter |
Yonsei University
|
| Submission Date |
2021-05-16T08:14:18.023
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
DXXS01
|
| NCBI TaxID |
56774
|
| Isolation Source |
feces
|
| Geo Location |
Japan
|
