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Genome Meta Information:
Prevotella melaninogenica SCHI0049.S.1 (GCA_019391735.1)
| HOMD Genome-ID | GCA_019391735.1 |
| HOMD Taxon-ID | HMT-469 |
| Species Name (in use by HOMD) | Prevotella melaninogenica |
| Organism Name (as deposited) | HMT-469 Prevotella melaninogenica SCHI0049.S.1 |
| Strain or Isolate | SCHI0049.S.1 |
| GTDB Taxonomy | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella;
s__Prevotella melaninogenica |
| Sequencing Technology | Illumina NextSeq |
| Genome Coverage | 82.0x |
| Contigs |
Number of Contigs: 62
|
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| Total Sequence Length | 3,285,599 (bp) |
| GC Percentage | 40.65 |
| MAG | |
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/019/391/735/GCA_019391735.1_ASM1939173v1 |
| CDS | 2621 |
| Genes | 2691 |
| mRNA | 2691 |
| misc RNA | 12 |
| rRNA | 7 |
| tRNA | 50 |
| tmRNA | 1 |
| CRISPR-cas |
No Available Data |
| Pangenomes (Beta) | No Available Data |
|
| Genome Assembly Name | ASM1939173v1 |
| GenBank Assembly Accession |
GCA_019391735.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_019391735.1
[NCBI]
|
| BioSample |
SAMN19926201
[NCBI]
|
| BioProject |
PRJNA742126
[NCBI]
|
| Submitter | University of the Sunshine Coast |
| Submission Date | 2021-06-28T23:40:07.630 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | live |
| WGS Project | JAHXQW01 |
| NCBI TaxID | 28132 |
| Isolation Source | Bronchial washing (contralateral lung; no tumour) |
| Geo Location | Australia: Brisbane |
| ANI (Average Nucluotide Identity) | 96.6 % |
| CheckM Completeness | 93.22 % |
| CheckM Percentile | 88.333336 % |
| CheckM Contamination | 3.85 % |
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