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Genome Meta Information:
Prevotella melaninogenica SCHI0027.S.6 (GCA_019375815.1)
| HOMD Genome-ID | GCA_019375815.1 |
| HOMD Taxon-ID |
HMT-469
|
| Species Name (in use by HOMD) | Prevotella melaninogenica |
| Organism Name (as deposited) | HMT-469 Prevotella melaninogenica SCHI0027.S.6 |
| Strain or Isolate | SCHI0027.S.6 |
| GTDB Taxonomy | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella;
s__Prevotella melaninogenica |
| Sequencing Technology | Illumina NextSeq |
| Genome Coverage | 146.0x |
| Contigs |
Number of Contigs: 63
|
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|
| Total Sequence Length | 3,422,092 (bp) |
| GC Percentage | 40.78 |
| MAG | |
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/019/375/815/GCA_019375815.1_ASM1937581v1 |
| CDS | 2814 |
| Genes | 2880 |
| mRNA | 2880 |
| misc RNA | 9 |
| rRNA | 8 |
| tRNA | 48 |
| tmRNA | 1 |
| CRISPR-cas |
No Available Data |
| Pangenomes (Beta) |
View in Anvi`o: Prevotella__melaninogenica__HMT_469
(Interactive)
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|
| Genome Assembly Name | ASM1937581v1 |
| GenBank Assembly Accession |
GCA_019375815.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_019375815.1
[NCBI]
|
| BioSample |
SAMN19926175
[NCBI]
|
| BioProject |
PRJNA742126
[NCBI]
|
| Submitter | University of the Sunshine Coast |
| Submission Date | 2021-06-28T23:40:07.320 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | live |
| WGS Project |
JAHXCP01
|
| NCBI TaxID |
28132
|
| Isolation Source | sputum |
| Geo Location | Australia: Brisbane |
| ANI (Average Nucluotide Identity) | 96.66 % |
| CheckM Completeness | 90.95 % |
| CheckM Percentile | 58.333332 % |
| CheckM Contamination | 5.11 % |
|
