Back To Genome Table
Genome Meta Information:
Prevotella melaninogenica SCHI0047.S.2 (GCA_019375575.1)
| HOMD Genome-ID | GCA_019375575.1 |
| HOMD Taxon-ID | HMT-469 |
| Species Name (in use by HOMD) | Prevotella melaninogenica |
| Organism Name (as deposited) | HMT-469 Prevotella melaninogenica SCHI0047.S.2 |
| Strain or Isolate | SCHI0047.S.2 |
| GTDB Taxonomy | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella;
s__Prevotella melaninogenica_B |
| Sequencing Technology | Illumina NextSeq |
| Genome Coverage | 145.0x |
| Contigs |
Number of Contigs: 42
|
[Open in Genome Viewer]
[Show Sequence]
[Linkout to NCBI]
|
|
| Total Sequence Length | 3,112,350 (bp) |
| GC Percentage | 40.98 |
| MAG | |
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/019/375/575/GCA_019375575.1_ASM1937557v1 |
| CDS | 2448 |
| Genes | 2508 |
| mRNA | 2508 |
| misc RNA | 8 |
| rRNA | 6 |
| tRNA | 45 |
| tmRNA | 1 |
| CRISPR-cas |
No Available Data |
| Pangenomes (Beta) | No Available Data |
|
| Genome Assembly Name | ASM1937557v1 |
| GenBank Assembly Accession |
GCA_019375575.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_019375575.1
[NCBI]
|
| BioSample |
SAMN19926189
[NCBI]
|
| BioProject |
PRJNA742126
[NCBI]
|
| Submitter | University of the Sunshine Coast |
| Submission Date | 2021-06-28T23:40:07.486 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | live |
| WGS Project | JAHXCE01 |
| NCBI TaxID | 28132 |
| Isolation Source | sputum |
| Geo Location | Australia: Brisbane |
| ANI (Average Nucluotide Identity) | 95.64 % |
| CheckM Completeness | 91.32 % |
| CheckM Percentile | 66.666664 % |
| CheckM Contamination | 2.13 % |
|
