Genome Meta Information: Haemophilus sp. HMT-036 SZY H68 (GCA_018829685.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_018829685.1 | ||
| HOMD Taxon-ID | HMT-036 | ||
| Species Name (in use by HOMD) | Haemophilus sp. HMT-036 | ||
| Organism Name (as deposited) | HMT-036 Haemophilus sp. HMT-036 SZY H68 | ||
| Strain or Isolate | SZY H68 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Haemophilus; s__Haemophilus haemolyticus_K |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 100.0x | ||
| Contigs |
|
||
| Total Sequence Length | 1,865,564 (bp) | ||
| GC Percentage | 38.24 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/829/685/GCA_018829685.1_ASM1882968v1 | ||
| CDS | 1738 | ||
| Genes | 1830 | ||
| mRNA | 1830 | ||
| misc RNA | 29 | ||
| rRNA | 10 | ||
| tRNA | 52 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.49 % | ||
| CheckM Contamination | 0.08 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.1 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP Site] | ||
| Pangenomes (Beta) |
View in Anvi`o:
Haemophilus__sp_HMT_036__HMT_036
(Interactive)
View SVG Image |
||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1882968v1 |
| GenBank Assembly Accession | GCA_018829685.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_018829685.1 [NCBI] |
| BioSample | SAMN19365527 [NCBI] |
| BioProject | PRJNA733005 [NCBI] |
| Submitter | The Second Clinic Medical College |
| Submission Date | 2021-05-27T10:44:07.520 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAHKKB01 |
| NCBI TaxID | 2839969 |
| Isolation Source | sputum specimen |
| Geo Location | China:Guangzhou |
