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Taxonomy: V4.0   |  16S rRNA RefSeq: V16.01   |  Genomic RefSeq: V11.01
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Genome Meta Information: Haemophilus sp. HMT-036 L2_059_000G1_dasL2_059_000G1_concoct_52 (GCA_018373485.1)
Genome Characteristics
FieldsValues
HOMD Genome-IDGCA_018373485.1
HOMD Taxon-IDHMT-036
Species Name (in use by HOMD)Haemophilus sp. HMT-036
Organism Name (as deposited)HMT-036 Haemophilus sp. HMT-036 L2_059_000G1_dasL2_059_000G1_concoct_52
Strain or IsolateL2_059_000G1_dasL2_059_000G1_concoct_52
GTDB Taxonomyd__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Haemophilus;
s__Haemophilus haemolyticus_K
Sequencing TechnologyIllumina NovaSeq 6000
Genome Coverage10.9x
Contigs
Number of Contigs: 17
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    • Total Sequence Length1,876,943 (bp)
    GC Percentage38.29
    MAGyes
    NCBI FTP URL ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/373/485/GCA_018373485.1_ASM1837348v1
    CDS1779
    Genes1862
    mRNA1862
    misc RNA31
    rRNA2
    tRNA49
    tmRNA1
    CRISPR-cas No Available Data
    Pangenomes (Beta)No Available Data
    NCBI Genome Metadata
    FieldsValues
    Genome Assembly NameASM1837348v1
    GenBank Assembly Accession GCA_018373485.1   [NCBI]   [GTDB]
    RefSeq Assembly Accession   [NCBI]
    BioSample SAMN17801504   [NCBI]
    BioProject PRJNA698986   [NCBI]
    SubmitterUniversity of California, Berkeley
    Submission Date2021-02-04T18:19:28.693
    Assembly Method
    Assembly LevelContig
    Sequencing Statuslive
    WGS ProjectJAHAGZ01
    NCBI TaxID726
    Isolation Sourceinfant feces
    Geo LocationUSA: Pittsburgh, Magee-Womens
    ANI (Average Nucluotide Identity)93.75 %
    CheckM Completeness %
    CheckM Percentile %
    CheckM Contamination %