HOMD Banner
Taxonomy: V4.0   |  16S rRNA RefSeq: V16.01   |  Genomic RefSeq: V11.01
Back To Genome Table
Genome Meta Information: Haemophilus sp. HMT-036 L3_098_047G1_dasL3_098_047G1_concoct_31 (GCA_018372995.1)
Genome Characteristics
FieldsValues
HOMD Genome-IDGCA_018372995.1
HOMD Taxon-IDHMT-036
Species Name (in use by HOMD)Haemophilus sp. HMT-036
Organism Name (as deposited)HMT-036 Haemophilus sp. HMT-036 L3_098_047G1_dasL3_098_047G1_concoct_31
Strain or IsolateL3_098_047G1_dasL3_098_047G1_concoct_31
GTDB Taxonomyd__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Haemophilus;
s__Haemophilus haemolyticus_K
Sequencing TechnologyIllumina NovaSeq 6000
Genome Coverage1.0x
Contigs
Number of Contigs: 47
  • [Open in Genome Viewer]
  • [Show Sequence]
  • [Linkout to NCBI]
    • Total Sequence Length2,055,066 (bp)
    GC Percentage38.11
    MAGyes
    NCBI FTP URL ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/372/995/GCA_018372995.1_ASM1837299v1
    CDS2049
    Genes2128
    mRNA2128
    misc RNA31
    rRNA3
    tRNA45
    tmRNA0
    CRISPR-cas No Available Data
    Pangenomes (Beta)No Available Data
    NCBI Genome Metadata
    FieldsValues
    Genome Assembly NameASM1837299v1
    GenBank Assembly Accession GCA_018372995.1   [NCBI]   [GTDB]
    RefSeq Assembly Accession   [NCBI]
    BioSample SAMN17801528   [NCBI]
    BioProject PRJNA698986   [NCBI]
    SubmitterUniversity of California, Berkeley
    Submission Date2021-02-04T18:19:29.120
    Assembly Method
    Assembly LevelScaffold
    Sequencing Statuslive
    WGS ProjectJAHAHX01
    NCBI TaxID726
    Isolation Sourceinfant feces
    Geo LocationUSA: Pittsburgh, Magee-Womens
    ANI (Average Nucluotide Identity)93.82 %
    CheckM Completeness %
    CheckM Percentile %
    CheckM Contamination %