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Genome Meta Information:
Prevotella melaninogenica F0301 (GCA_018127965.1)
| HOMD Genome-ID | GCA_018127965.1 |
| HOMD Taxon-ID |
HMT-469
|
| Species Name (in use by HOMD) | Prevotella melaninogenica |
| Organism Name (as deposited) | HMT-469 Prevotella melaninogenica F0301 |
| Strain or Isolate | F0301 |
| GTDB Taxonomy | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella;
s__Prevotella melaninogenica_B |
| Sequencing Technology | PacBio Sequel |
| Genome Coverage | 125.0x |
| Contigs |
|
| Total Sequence Length | 3,218,481 (bp) |
| GC Percentage | 40.86 |
| MAG | |
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/127/965/GCA_018127965.1_ASM1812796v1 |
| CDS | 2611 |
| Genes | 2687 |
| mRNA | 2687 |
| misc RNA | 13 |
| rRNA | 12 |
| tRNA | 50 |
| tmRNA | 1 |
| CRISPR-cas |
No Available Data |
| Pangenomes (Beta) |
View in Anvi`o: Prevotella__melaninogenica__HMT_469
(Interactive)
View SVG Image
|
|
| Genome Assembly Name | ASM1812796v1 |
| GenBank Assembly Accession |
GCA_018127965.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_018127965.1
[NCBI]
|
| BioSample |
SAMN18352188
[NCBI]
|
| BioProject |
PRJNA282954
[NCBI]
|
| Submitter | The Forsyth Institute |
| Submission Date | 2021-03-18T16:33:06.617 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | live |
| WGS Project |
|
| NCBI TaxID |
28132
|
| Isolation Source | human oral cavity |
| Geo Location | USA: Blacksberg, Virginia |
| ANI (Average Nucluotide Identity) | 95.15 % |
| CheckM Completeness | 88.12 % |
| CheckM Percentile | 35 % |
| CheckM Contamination | 8.04 % |
|
