Genome Meta Information: Agrobacterium tumefaciens 6N2 (GCA_017726655.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_017726655.1 | ||
| HOMD Taxon-ID | HMT-485 | ||
| Species Name (in use by HOMD) | Agrobacterium tumefaciens | ||
| Organism Name (as deposited) | HMT-485 Agrobacterium tumefaciens 6N2 | ||
| Strain or Isolate | 6N2 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Agrobacterium; s__Agrobacterium tumefaciens_B |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 63.1x | ||
| Contigs |
|
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| Total Sequence Length | 5,082,709 (bp) | ||
| GC Percentage | 58.94 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/017/726/655/GCA_017726655.1_ASM1772665v1 | ||
| CDS | 4811 | ||
| Genes | 4929 | ||
| mRNA | 4929 | ||
| misc RNA | 49 | ||
| rRNA | 12 | ||
| tRNA | 56 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 85.34 % | ||
| CheckM Completeness | 99.72 % | ||
| CheckM Contamination | 0.02 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.09 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1772665v1 |
| GenBank Assembly Accession | GCA_017726655.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_017726655.1 [NCBI] |
| BioSample | SAMN16786093 [NCBI] |
| BioProject | PRJNA677994 [NCBI] |
| Submitter | PROIMI - CONICET |
| Submission Date | 2020-11-12T16:37:06.323 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 358 |
| Isolation Source | Tucuman, Argentina |
| Geo Location | Argentina: Tucuman |
