Back To Genome Table
Genome Meta Information:
Acidovorax
temperans
IB03 (GCA_016406015.1)
| HOMD Genome-ID |
GCA_016406015.1
|
| HOMD Taxon-ID |
HMT-216
|
| Species Name (in use by HOMD) |
Acidovorax temperans
|
| Organism Name (as deposited) |
HMT-216 Acidovorax temperans IB03
|
| Strain or Isolate |
IB03
|
GTDB (V)
Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Acidovorax;
s__Acidovorax temperans |
| Sequencing Technology |
Illumina MiSeq
|
| Genome Coverage |
100.1x
|
| Contigs |
Number of Contigs: 103
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
4,313,039 (bp) |
| GC Percentage |
63.24
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/406/015/GCA_016406015.1_ASM1640601v1
|
| CDS |
3957
|
| Genes |
4032
|
| mRNA |
4032
|
| misc RNA |
27
|
| rRNA |
0
|
| tRNA |
47
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
%
|
| CheckM Completeness |
99.49 %
|
| CheckM Contamination |
0.4 %
|
| CheckM2 Completeness |
100 %
|
| CheckM2 Contamination |
0.5 %
|
| CRISPR-cas |
Ambiguous
[HOMD FTP Site]
|
| Pangenomes (Beta) |
No Pangenomes Available.
|
| Genome Assembly Name |
ASM1640601v1
|
| GenBank Assembly Accession |
GCA_016406015.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_016406015.1
[NCBI]
|
| BioSample |
SAMN16411056
[NCBI]
|
| BioProject |
PRJNA666993
[NCBI]
|
| Submitter |
Technical University of Denmark
|
| Submission Date |
2020-10-10T14:15:07.050
|
| Assembly Method |
|
| Assembly Level |
Scaffold
|
| Sequencing Status |
|
| WGS
Project |
JAEFCH01
|
| NCBI TaxID |
2779366
|
| Isolation Source |
wastewater
|
| Geo Location |
Denmark:Kongens Lyngby
|
