Genome Meta Information: Actinomyces naeslundii FDAARGOS_1037 (GCA_016127855.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_016127855.1 | ||
| HOMD Taxon-ID | HMT-176 | ||
| Species Name (in use by HOMD) | Actinomyces naeslundii | ||
| Organism Name (as deposited) | HMT-176 Actinomyces naeslundii FDAARGOS_1037 | ||
| Strain or Isolate | FDAARGOS_1037 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces; s__Actinomyces naeslundii |
||
| Sequencing Technology | Pacbio; Illumina | ||
| Genome Coverage | 708.6x | ||
| Contigs |
|
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| Total Sequence Length | 3,152,123 (bp) | ||
| GC Percentage | 67.88 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/127/855/GCA_016127855.1_ASM1612785v1 | ||
| CDS | 2603 | ||
| Genes | 2680 | ||
| mRNA | 2680 | ||
| misc RNA | 16 | ||
| rRNA | 9 | ||
| tRNA | 51 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 100 % | ||
| CheckM Contamination | 0.47 % | ||
| CheckM2 Completeness | 99.94 % | ||
| CheckM2 Contamination | 0.11 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1612785v1 |
| GenBank Assembly Accession | GCA_016127855.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_016127855.1 [NCBI] |
| BioSample | SAMN16357206 [NCBI] |
| BioProject | PRJNA231221 [NCBI] |
| Submitter | US Food and Drug Administration |
| Submission Date | 2020-10-03T14:56:09.353 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1655 |
| Isolation Source | missing |
| Geo Location | USA:VA |
