Back To Genome Table
Genome Meta Information:
Hoylesella
nanceiensis
JCVI_32_bin.47 (GCA_015262265.1)
| HOMD Genome-ID |
GCA_015262265.1
|
| HOMD Taxon-ID |
HMT-299
|
| Species Name (in use by HOMD) |
Hoylesella nanceiensis
|
| Organism Name (as deposited) |
HMT-299 Hoylesella nanceiensis JCVI_32_bin.47
|
| Strain or Isolate |
JCVI_32_bin.47
|
GTDB (V)
Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella;
s__Prevotella nanceiensis |
| Sequencing Technology |
Illumina NextSeq
|
| Genome Coverage |
15.8x
|
| Contigs |
Number of Contigs: 160
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
2,275,608 (bp) |
| GC Percentage |
38.12
|
| MAG |
yes
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/015/262/265/GCA_015262265.1_ASM1526226v1
|
| CDS |
1738
|
| Genes |
1770
|
| mRNA |
1770
|
| misc RNA |
5
|
| rRNA |
0
|
| tRNA |
27
|
| tmRNA |
0
|
| ANI (Average Nucluotide Identity) |
96.7 %
|
| CheckM Completeness |
96.55 %
|
| CheckM Contamination |
0.45 %
|
| CheckM2 Completeness |
93.57 %
|
| CheckM2 Contamination |
1.46 %
|
| CRISPR-cas |
No Available
Data |
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM1526226v1
|
| GenBank Assembly Accession |
GCA_015262265.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_015262265.1
[NCBI]
|
| BioSample |
SAMN14570910
[NCBI]
|
| BioProject |
PRJNA624185
[NCBI]
|
| Submitter |
J. Craig Venter Institute
|
| Submission Date |
2020-04-09T20:41:07.653
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
JABZTD01
|
| NCBI TaxID |
425941
|
| Isolation Source |
saliva
|
| Geo Location |
USA: UCLA School of Dentistry
|
