Genome Meta Information: Hoylesella nanceiensis JCVI_49_bin.8 (GCA_015262145.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_015262145.1 | ||
| HOMD Taxon-ID | HMT-299 | ||
| Species Name (in use by HOMD) | Hoylesella nanceiensis | ||
| Organism Name (as deposited) | HMT-299 Hoylesella nanceiensis JCVI_49_bin.8 | ||
| Strain or Isolate | JCVI_49_bin.8 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella nanceiensis |
||
| Sequencing Technology | Illumina NextSeq | ||
| Genome Coverage | 4.3x | ||
| Contigs |
|
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| Total Sequence Length | 2,259,893 (bp) | ||
| GC Percentage | 38.28 | ||
| MAG | yes | ||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/015/262/145/GCA_015262145.1_ASM1526214v1 | ||
| CDS | 1715 | ||
| Genes | 1748 | ||
| mRNA | 1748 | ||
| misc RNA | 4 | ||
| rRNA | 0 | ||
| tRNA | 29 | ||
| tmRNA | 0 | ||
| ANI (Average Nucluotide Identity) | 96.74 % | ||
| CheckM Completeness | 96.48 % | ||
| CheckM Contamination | 0.43 % | ||
| CheckM2 Completeness | 91.28 % | ||
| CheckM2 Contamination | 1.54 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1526214v1 |
| GenBank Assembly Accession | GCA_015262145.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_015262145.1 [NCBI] |
| BioSample | SAMN14570916 [NCBI] |
| BioProject | PRJNA624185 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2020-04-09T20:41:07.743 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | JABZTJ01 |
| NCBI TaxID | 425941 |
| Isolation Source | saliva |
| Geo Location | USA: UCLA School of Dentistry |
