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Genome Meta Information:
Prevotella melaninogenica JCVI_11_bin.12 (GCA_015260635.1)
| HOMD Genome-ID | GCA_015260635.1 |
| HOMD Taxon-ID |
HMT-469
|
| Species Name (in use by HOMD) | Prevotella melaninogenica |
| Organism Name (as deposited) | HMT-469 Prevotella melaninogenica JCVI_11_bin.12 |
| Strain or Isolate | JCVI_11_bin.12 |
| GTDB Taxonomy | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella;
s__Prevotella melaninogenica |
| Sequencing Technology | Illumina NextSeq |
| Genome Coverage | 54.8x |
| Contigs |
Number of Contigs: 98
|
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| Total Sequence Length | 3,029,562 (bp) |
| GC Percentage | 40.87 |
| MAG | yes |
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/015/260/635/GCA_015260635.1_ASM1526063v1 |
| CDS | 2362 |
| Genes | 2418 |
| mRNA | 2418 |
| misc RNA | 9 |
| rRNA | 1 |
| tRNA | 45 |
| tmRNA | 1 |
| CRISPR-cas |
No Available Data |
| Pangenomes (Beta) |
View in Anvi`o: Prevotella__melaninogenica__HMT_469
(Interactive)
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|
| Genome Assembly Name | ASM1526063v1 |
| GenBank Assembly Accession |
GCA_015260635.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_015260635.1
[NCBI]
|
| BioSample |
SAMN14570990
[NCBI]
|
| BioProject |
PRJNA624185
[NCBI]
|
| Submitter | J. Craig Venter Institute |
| Submission Date | 2020-04-09T20:41:08.876 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | live |
| WGS Project |
JABZWF01
|
| NCBI TaxID |
59823
|
| Isolation Source | saliva |
| Geo Location | USA: UCLA School of Dentistry |
| ANI (Average Nucluotide Identity) | % |
| CheckM Completeness | 98.37 % |
| CheckM Percentile | 91.14688 % |
| CheckM Contamination | 0.16 % |
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