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Taxonomy: V4.0   |  16S rRNA RefSeq: V16.01   |  Genomic RefSeq: V11.01
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Genome Meta Information: Prevotella melaninogenica JCVI_18_bin.4 (GCA_015260495.1)
Genome Characteristics
FieldsValues
HOMD Genome-IDGCA_015260495.1
HOMD Taxon-ID HMT-469
Species Name (in use by HOMD)Prevotella melaninogenica
Organism Name (as deposited)HMT-469 Prevotella melaninogenica JCVI_18_bin.4
Strain or IsolateJCVI_18_bin.4
GTDB Taxonomyd__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella;
s__Prevotella melaninogenica
Sequencing TechnologyIllumina NextSeq
Genome Coverage26.2x
Contigs
Number of Contigs: 124
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    Total Sequence Length3,009,011 (bp)
    GC Percentage40.83
    MAGyes
    NCBI FTP URL ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/015/260/495/GCA_015260495.1_ASM1526049v1
    CDS2350
    Genes2397
    mRNA2397
    misc RNA8
    rRNA1
    tRNA37
    tmRNA1
    CRISPR-cas No Available Data
    Pangenomes (Beta) View in Anvi`o: Prevotella__melaninogenica__HMT_469 (Interactive)
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    NCBI Genome Metadata
    FieldsValues
    Genome Assembly NameASM1526049v1
    GenBank Assembly Accession GCA_015260495.1   [NCBI]   [GTDB]
    RefSeq Assembly Accession GCF_015260495.1   [NCBI]
    BioSample SAMN14570996   [NCBI]
    BioProject PRJNA624185   [NCBI]
    SubmitterJ. Craig Venter Institute
    Submission Date2020-04-09T20:41:08.966
    Assembly Method
    Assembly LevelScaffold
    Sequencing Statuslive
    WGS Project JABZWL01
    NCBI TaxID 59823
    Isolation Sourcesaliva
    Geo LocationUSA: UCLA School of Dentistry
    ANI (Average Nucluotide Identity) %
    CheckM Completeness97.5 %
    CheckM Percentile84.50704 %
    CheckM Contamination %