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Genome Meta Information:
Prevotella melaninogenica JCVI_27_bin.6 (GCA_015260465.1)
| HOMD Genome-ID | GCA_015260465.1 |
| HOMD Taxon-ID | HMT-469 |
| Species Name (in use by HOMD) | Prevotella melaninogenica |
| Organism Name (as deposited) | HMT-469 Prevotella melaninogenica JCVI_27_bin.6 |
| Strain or Isolate | JCVI_27_bin.6 |
| GTDB Taxonomy | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella;
s__Prevotella melaninogenica |
| Sequencing Technology | Illumina NextSeq |
| Genome Coverage | 106.0x |
| Contigs |
Number of Contigs: 159
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| Total Sequence Length | 2,962,341 (bp) |
| GC Percentage | 40.93 |
| MAG | yes |
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/015/260/465/GCA_015260465.1_ASM1526046v1 |
| CDS | 2281 |
| Genes | 2327 |
| mRNA | 2327 |
| misc RNA | 8 |
| rRNA | 0 |
| tRNA | 37 |
| tmRNA | 1 |
| CRISPR-cas |
No Available Data |
| Pangenomes (Beta) | No Available Data |
|
| Genome Assembly Name | ASM1526046v1 |
| GenBank Assembly Accession |
GCA_015260465.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_015260465.1
[NCBI]
|
| BioSample |
SAMN14571000
[NCBI]
|
| BioProject |
PRJNA624185
[NCBI]
|
| Submitter | J. Craig Venter Institute |
| Submission Date | 2020-04-09T20:41:09.023 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | live |
| WGS Project | JABZWP01 |
| NCBI TaxID | 59823 |
| Isolation Source | saliva |
| Geo Location | USA: UCLA School of Dentistry |
| ANI (Average Nucluotide Identity) | % |
| CheckM Completeness | 97.07 % |
| CheckM Percentile | 81.89135 % |
| CheckM Contamination | 0.42 % |
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