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Genome Meta Information:
Anaerovoracaceae [G1]
sulci
JCVI_18_bin.6 (GCA_015256025.1)
| HOMD Genome-ID |
GCA_015256025.1
|
| HOMD Taxon-ID |
HMT-467
|
| Species Name (in use by HOMD) |
Anaerovoracaceae [G1] sulci
|
| Organism Name (as deposited) |
HMT-467 Peptostreptococcaceae [G1 "Eubacterium"] sulci JCVI_18_bin.6
|
| Strain or Isolate |
JCVI_18_bin.6
|
GTDB (V)
Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Peptostreptococcales;f__Anaerovoracaceae;g__Eubacterium_B;
s__Eubacterium_B sulci |
| Sequencing Technology |
Illumina NextSeq
|
| Genome Coverage |
5.4x
|
| Contigs |
Number of Contigs: 126
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
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|
|
| Total Sequence Length |
1,743,182 (bp) |
| GC Percentage |
39.89
|
| MAG |
yes
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/015/256/025/GCA_015256025.1_ASM1525602v1
|
| CDS |
1570
|
| Genes |
1634
|
| mRNA |
1634
|
| misc RNA |
25
|
| rRNA |
0
|
| tRNA |
38
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
%
|
| CheckM Completeness |
99.65 %
|
| CheckM Contamination |
0.71 %
|
| CheckM2 Completeness |
90.26 %
|
| CheckM2 Contamination |
2.6 %
|
| CRISPR-cas |
1 Contig
[View]
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM1525602v1
|
| GenBank Assembly Accession |
GCA_015256025.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
[NCBI]
|
| BioSample |
SAMN14570743
[NCBI]
|
| BioProject |
PRJNA624185
[NCBI]
|
| Submitter |
J. Craig Venter Institute
|
| Submission Date |
2020-04-09T20:00:08.866
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
JABZMW01
|
| NCBI TaxID |
143393
|
| Isolation Source |
saliva
|
| Geo Location |
USA: UCLA School of Dentistry
|
