Genome Meta Information: Corynebacterium striatum 1954 (GCA_014610855.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_014610855.1 | ||
| HOMD Taxon-ID | HMT-072 | ||
| Species Name (in use by HOMD) | Corynebacterium striatum | ||
| Organism Name (as deposited) | HMT-072 Corynebacterium striatum 1954 | ||
| Strain or Isolate | 1954 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium striatum |
||
| Sequencing Technology | Ion Personal Genome Machine | ||
| Genome Coverage | 109.0x | ||
| Contigs |
|
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| Total Sequence Length | 2,840,792 (bp) | ||
| GC Percentage | 59.27 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/014/610/855/GCA_014610855.1_ASM1461085v1 | ||
| CDS | 2894 | ||
| Genes | 2976 | ||
| mRNA | 2976 | ||
| misc RNA | 9 | ||
| rRNA | 10 | ||
| tRNA | 62 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.17 % | ||
| CheckM Completeness | 96.92 % | ||
| CheckM Contamination | 0.36 % | ||
| CheckM2 Completeness | 98.69 % | ||
| CheckM2 Contamination | 0.65 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1461085v1 |
| GenBank Assembly Accession | GCA_014610855.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_014610855.1 [NCBI] |
| BioSample | SAMN08013311 [NCBI] |
| BioProject | PRJNA418005 [NCBI] |
| Submitter | Fundacao Oswaldo Cruz |
| Submission Date | 2017-11-11T13:43:04.613 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | PGGF01 |
| NCBI TaxID | 43770 |
| Isolation Source | Surgical wound secretion |
| Geo Location | Brazil: Rio de Janeiro |
