Genome Meta Information: Aquamicrobium lusatiense DSM 11099 (GCA_014201615.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_014201615.1 | ||
| HOMD Taxon-ID | HMT-660 | ||
| Species Name (in use by HOMD) | Aquamicrobium lusatiense | ||
| Organism Name (as deposited) | HMT-660 Aquamicrobium lusatiense DSM 11099 | ||
| Strain or Isolate | DSM 11099 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Mesorhizobium; s__Mesorhizobium lusatiense |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 342.0x | ||
| Contigs |
|
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| Total Sequence Length | 4,389,592 (bp) | ||
| GC Percentage | 62.6 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/014/201/615/GCA_014201615.1_ASM1420161v1 | ||
| CDS | 4063 | ||
| Genes | 4160 | ||
| mRNA | 4160 | ||
| misc RNA | 44 | ||
| rRNA | 4 | ||
| tRNA | 48 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.3 % | ||
| CheckM Contamination | 0.89 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.03 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1420161v1 |
| GenBank Assembly Accession | GCA_014201615.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_014201615.1 [NCBI] |
| BioSample | SAMN14908351 [NCBI] |
| BioProject | PRJNA632322 [NCBI] |
| Submitter | DOE Joint Genome Institute |
| Submission Date | 2020-05-12T21:58:13.723 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | JACHEU01 |
| NCBI TaxID | 89772 |
| Isolation Source | missing |
| Geo Location | missing |
