Genome Meta Information: Alloprevotella rava DSM 22548 (GCA_014195585.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_014195585.1 | ||
| HOMD Taxon-ID | HMT-302 | ||
| Species Name (in use by HOMD) | Alloprevotella rava | ||
| Organism Name (as deposited) | HMT-302 Alloprevotella rava DSM 22548 | ||
| Strain or Isolate | DSM 22548 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Alloprevotella; s__Alloprevotella rava |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 586.0x | ||
| Contigs |
|
||
| Total Sequence Length | 2,557,292 (bp) | ||
| GC Percentage | 45.32 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/014/195/585/GCA_014195585.1_ASM1419558v1 | ||
| CDS | 2115 | ||
| Genes | 2177 | ||
| mRNA | 2177 | ||
| misc RNA | 5 | ||
| rRNA | 4 | ||
| tRNA | 52 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.16 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 99.94 % | ||
| CheckM2 Contamination | 0.06 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1419558v1 |
| GenBank Assembly Accession | GCA_014195585.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_014195585.1 [NCBI] |
| BioSample | SAMN12025113 [NCBI] |
| BioProject | PRJNA546761 [NCBI] |
| Submitter | DOE Joint Genome Institute |
| Submission Date | 2019-06-11T18:10:51.686 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JACICA01 |
| NCBI TaxID | 671218 |
| Isolation Source | missing |
| Geo Location | missing |
