Genome Meta Information: Corynebacterium striatum CSc27 (GCA_011682965.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_011682965.1 | ||
| HOMD Taxon-ID | HMT-072 | ||
| Species Name (in use by HOMD) | Corynebacterium striatum | ||
| Organism Name (as deposited) | HMT-072 Corynebacterium striatum CSc27 | ||
| Strain or Isolate | CSc27 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium striatum |
||
| Sequencing Technology | Illumina NovaSeq | ||
| Genome Coverage | 100.0x | ||
| Contigs |
|
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| Total Sequence Length | 2,796,099 (bp) | ||
| GC Percentage | 59.31 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/011/682/965/GCA_011682965.1_ASM1168296v1 | ||
| CDS | 2588 | ||
| Genes | 2659 | ||
| mRNA | 2659 | ||
| misc RNA | 9 | ||
| rRNA | 6 | ||
| tRNA | 55 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.99 % | ||
| CheckM Completeness | 99.67 % | ||
| CheckM Contamination | 0.09 % | ||
| CheckM2 Completeness | 99.99 % | ||
| CheckM2 Contamination | 0.74 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1168296v1 |
| GenBank Assembly Accession | GCA_011682965.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_011682965.1 [NCBI] |
| BioSample | SAMN11811888 [NCBI] |
| BioProject | PRJNA544998 [NCBI] |
| Submitter | China CDC |
| Submission Date | 2019-05-21T21:57:06.740 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | VCOZ01 |
| NCBI TaxID | 43770 |
| Isolation Source | sputum |
| Geo Location | China: Beijing |
