Genome Meta Information: Corynebacterium gottingense NML180780 (GCA_007786415.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_007786415.1 | ||
| HOMD Taxon-ID | HMT-207 | ||
| Species Name (in use by HOMD) | Corynebacterium gottingense | ||
| Organism Name (as deposited) | HMT-207 Corynebacterium gottingense NML180780 | ||
| Strain or Isolate | NML180780 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium gottingense |
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| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 125.0x | ||
| Contigs |
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| Total Sequence Length | 2,584,921 (bp) | ||
| GC Percentage | 65.42 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/007/786/415/GCA_007786415.1_ASM778641v1 | ||
| CDS | 2346 | ||
| Genes | 2417 | ||
| mRNA | 2417 | ||
| misc RNA | 10 | ||
| rRNA | 2 | ||
| tRNA | 58 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.34 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 99.99 % | ||
| CheckM2 Contamination | 0.17 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM778641v1 |
| GenBank Assembly Accession | GCA_007786415.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_007786415.1 [NCBI] |
| BioSample | SAMN12341838 [NCBI] |
| BioProject | PRJNA556156 [NCBI] |
| Submitter | National Microbiology Laboratory |
| Submission Date | 2019-07-23T09:28:05.170 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | VNKN01 |
| NCBI TaxID | 2598459 |
| Isolation Source | shoulder tissue |
| Geo Location | Canada: Prince Edward Island |
