Genome Meta Information: Acidovorax temperans DSM 7270 (GCA_006716905.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_006716905.1 | ||
| HOMD Taxon-ID | HMT-216 | ||
| Species Name (in use by HOMD) | Acidovorax temperans | ||
| Organism Name (as deposited) | HMT-216 Acidovorax temperans DSM 7270 | ||
| Strain or Isolate | DSM 7270 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Acidovorax; s__Acidovorax temperans |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 572.0x | ||
| Contigs |
|
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| Total Sequence Length | 4,651,394 (bp) | ||
| GC Percentage | 63.2 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/006/716/905/GCA_006716905.1_ASM671690v1 | ||
| CDS | 4300 | ||
| Genes | 4393 | ||
| mRNA | 4393 | ||
| misc RNA | 23 | ||
| rRNA | 12 | ||
| tRNA | 57 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.49 % | ||
| CheckM Contamination | 0.76 % | ||
| CheckM2 Completeness | 99.98 % | ||
| CheckM2 Contamination | 0.29 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM671690v1 |
| GenBank Assembly Accession | GCA_006716905.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_006716905.1 [NCBI] |
| BioSample | SAMN05443405 [NCBI] |
| BioProject | PRJNA332047 [NCBI] |
| Submitter | DOE Joint Genome Institute |
| Submission Date | 2016-07-26T21:05:24.330 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | VFPV01 |
| NCBI TaxID | 80878 |
| Isolation Source | missing |
| Geo Location | missing |
