Genome Meta Information: Haemophilus sp. HMT-036 60982 B Hi-1 (GCA_006439215.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_006439215.1 | ||
| HOMD Taxon-ID | HMT-036 | ||
| Species Name (in use by HOMD) | Haemophilus sp. HMT-036 | ||
| Organism Name (as deposited) | HMT-036 Haemophilus sp. HMT-036 60982 B Hi-1 | ||
| Strain or Isolate | 60982 B Hi-1 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Haemophilus; s__Haemophilus seminalis |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 202.0x | ||
| Contigs |
|
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| Total Sequence Length | 1,921,666 (bp) | ||
| GC Percentage | 38.27 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/006/439/215/GCA_006439215.1_ASM643921v1 | ||
| CDS | 1832 | ||
| Genes | 1932 | ||
| mRNA | 1932 | ||
| misc RNA | 32 | ||
| rRNA | 14 | ||
| tRNA | 53 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 93.78 % | ||
| CheckM Completeness | 99.49 % | ||
| CheckM Contamination | 0.08 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.06 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM643921v1 |
| GenBank Assembly Accession | GCA_006439215.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_006439215.1 [NCBI] |
| BioSample | SAMN10537218 [NCBI] |
| BioProject | PRJNA509094 [NCBI] |
| Submitter | Menzies School of Health Research |
| Submission Date | 2018-12-09T23:46:03.713 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | SDPD01 |
| NCBI TaxID | 726 |
| Isolation Source | |
| Geo Location | Australia |
