Genome Meta Information: Acinetobacter johnsonii IC001 (GCA_003952785.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003952785.1 | ||
| HOMD Taxon-ID | HMT-297 | ||
| Species Name (in use by HOMD) | Acinetobacter johnsonii | ||
| Organism Name (as deposited) | HMT-297 Acinetobacter johnsonii IC001 | ||
| Strain or Isolate | IC001 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter; s__Acinetobacter johnsonii |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 102.0x | ||
| Contigs |
|
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| Total Sequence Length | 3,736,232 (bp) | ||
| GC Percentage | 41.47 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/952/785/GCA_003952785.1_ASM395278v1 | ||
| CDS | 3653 | ||
| Genes | 3812 | ||
| mRNA | 3812 | ||
| misc RNA | 49 | ||
| rRNA | 21 | ||
| tRNA | 88 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.08 % | ||
| CheckM Completeness | 100 % | ||
| CheckM Contamination | 0.27 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 1.49 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes (Beta) | No Pangenomes Available. | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM395278v1 |
| GenBank Assembly Accession | GCA_003952785.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003952785.1 [NCBI] |
| BioSample | SAMN07298690 [NCBI] |
| BioProject | PRJNA392395 [NCBI] |
| Submitter | The University of Tokyo |
| Submission Date | 2017-06-29T09:07:04.013 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 40214 |
| Isolation Source | |
| Geo Location | Japan: Tokyo |
