Genome Meta Information: Acinetobacter junii AJ_351 (GCA_003939335.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003939335.2 | ||
| HOMD Taxon-ID | HMT-282 | ||
| Species Name (in use by HOMD) | Acinetobacter junii | ||
| Organism Name (as deposited) | HMT-282 Acinetobacter junii AJ_351 | ||
| Strain or Isolate | AJ_351 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter; s__Acinetobacter junii |
||
| Sequencing Technology | Illumina NextSeq; Oxford Nanopore MinION | ||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 3,769,270 (bp) | ||
| GC Percentage | 38.85 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/939/335/GCA_003939335.2_ASM393933v2 | ||
| CDS | 3628 | ||
| Genes | 3744 | ||
| mRNA | 3744 | ||
| misc RNA | 25 | ||
| rRNA | 18 | ||
| tRNA | 72 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.06 % | ||
| CheckM Completeness | 100 % | ||
| CheckM Contamination | 0.63 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 1.51 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM393933v2 |
| GenBank Assembly Accession | GCA_003939335.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003939335.2 [NCBI] |
| BioSample | SAMN10249206 [NCBI] |
| BioProject | PRJNA497126 [NCBI] |
| Submitter | Washington University in St. Louis School of Medicine |
| Submission Date | 2018-10-16T18:54:09.070 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 40215 |
| Isolation Source | washroom sink in hospital intensive care unit |
| Geo Location | Pakistan |
