Genome Meta Information: Arachnia propionica FDAARGOS_578 (GCA_003797385.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003797385.1 | ||
| HOMD Taxon-ID | HMT-739 | ||
| Species Name (in use by HOMD) | Arachnia propionica | ||
| Organism Name (as deposited) | HMT-739 Arachnia propionica FDAARGOS_578 | ||
| Strain or Isolate | FDAARGOS_578 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Propionibacteriales;f__Propionibacteriaceae;g__Arachnia; s__Arachnia propionica |
||
| Sequencing Technology | PacBio; Illumina | ||
| Genome Coverage | 933.0x | ||
| Contigs |
|
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| Total Sequence Length | 3,467,615 (bp) | ||
| GC Percentage | 66.06 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/797/385/GCA_003797385.1_ASM379738v1 | ||
| CDS | 3065 | ||
| Genes | 3145 | ||
| mRNA | 3145 | ||
| misc RNA | 21 | ||
| rRNA | 6 | ||
| tRNA | 52 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99 % | ||
| CheckM Completeness | 97.47 % | ||
| CheckM Contamination | 1.22 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.13 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM379738v1 |
| GenBank Assembly Accession | GCA_003797385.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003797385.1 [NCBI] |
| BioSample | SAMN10228558 [NCBI] |
| BioProject | PRJNA231221 [NCBI] |
| Submitter | US Food and Drug Administration |
| Submission Date | 2018-10-10T13:50:05.096 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | RKKA01 |
| NCBI TaxID | 1750 |
| Isolation Source | Human oral cavity |
| Geo Location | Unknown |
