Genome Meta Information: Acidovorax ebreus DSM 15985 (GCA_003755025.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003755025.1 | ||
| HOMD Taxon-ID | HMT-209 | ||
| Species Name (in use by HOMD) | Acidovorax ebreus | ||
| Organism Name (as deposited) | HMT-209 Acidovorax ebreus DSM 15985 | ||
| Strain or Isolate | DSM 15985 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Diaphorobacter; s__Diaphorobacter nitroreducens |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 410.0x | ||
| Contigs |
|
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| Total Sequence Length | 3,654,005 (bp) | ||
| GC Percentage | 66.84 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/755/025/GCA_003755025.1_ASM375502v1 | ||
| CDS | 3350 | ||
| Genes | 3427 | ||
| mRNA | 3427 | ||
| misc RNA | 20 | ||
| rRNA | 3 | ||
| tRNA | 53 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.9 % | ||
| CheckM Contamination | 0.15 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.05 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM375502v1 |
| GenBank Assembly Accession | GCA_003755025.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003755025.1 [NCBI] |
| BioSample | SAMN10362780 [NCBI] |
| BioProject | PRJNA500344 [NCBI] |
| Submitter | DOE Joint Genome Institute |
| Submission Date | 2018-11-01T21:17:23.800 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | RJVL01 |
| NCBI TaxID | 164759 |
| Isolation Source | missing |
| Geo Location | missing |
