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Genome Meta Information:
Prevotella melaninogenica GAI 07411 (GCA_003609775.1)
| HOMD Genome-ID | GCA_003609775.1 |
| HOMD Taxon-ID |
HMT-469
|
| Species Name (in use by HOMD) | Prevotella melaninogenica |
| Organism Name (as deposited) | HMT-469 Prevotella melaninogenica GAI 07411 |
| Strain or Isolate | GAI 07411 |
| GTDB Taxonomy | d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella;
s__Prevotella melaninogenica_A |
| Sequencing Technology | PacBio RSII |
| Genome Coverage | 246.0x |
| Contigs |
|
| Total Sequence Length | 3,090,326 (bp) |
| GC Percentage | 40.77 |
| MAG | |
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/609/775/GCA_003609775.1_ASM360977v1 |
| CDS | 2407 |
| Genes | 2480 |
| mRNA | 2480 |
| misc RNA | 8 |
| rRNA | 12 |
| tRNA | 52 |
| tmRNA | 1 |
| CRISPR-cas |
No Available Data |
| Pangenomes (Beta) |
View in Anvi`o: Prevotella__melaninogenica__HMT_469
(Interactive)
View SVG Image
|
|
| Genome Assembly Name | ASM360977v1 |
| GenBank Assembly Accession |
GCA_003609775.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_003609775.1
[NCBI]
|
| BioSample |
SAMD00078755
[NCBI]
|
| BioProject |
PRJDB5703
[NCBI]
|
| Submitter | Department of Pediatric Dentistry, Nagasaki University Graduate School of Biomedical Sciences |
| Submission Date | 2017-09-02T01:00:30.256 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | live |
| WGS Project |
|
| NCBI TaxID |
28132
|
| Isolation Source | |
| Geo Location | Japan |
| ANI (Average Nucluotide Identity) | 90.71 % |
| CheckM Completeness | 89.21 % |
| CheckM Percentile | 41.666668 % |
| CheckM Contamination | 2.34 % |
|
