Genome Meta Information: Bacteroides stercoris AF12-7 (GCA_003464965.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003464965.1 | ||
| HOMD Taxon-ID | HMT-969 | ||
| Species Name (in use by HOMD) | Bacteroides stercoris | ||
| Organism Name (as deposited) | HMT-969 Bacteroides stercoris AF12-7 | ||
| Strain or Isolate | AF12-7 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides; s__Bacteroides stercoris |
||
| Sequencing Technology | Illumina Hiseq | ||
| Genome Coverage | 100.0x | ||
| Contigs |
|
||
| Total Sequence Length | 4,015,577 (bp) | ||
| GC Percentage | 46.12 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/464/965/GCA_003464965.1_ASM346496v1 | ||
| CDS | 3458 | ||
| Genes | 3529 | ||
| mRNA | 3529 | ||
| misc RNA | 14 | ||
| rRNA | 3 | ||
| tRNA | 54 | ||
| tmRNA | 0 | ||
| ANI (Average Nucluotide Identity) | 98.76 % | ||
| CheckM Completeness | 99.26 % | ||
| CheckM Contamination | 0.37 % | ||
| CheckM2 Completeness | 99.73 % | ||
| CheckM2 Contamination | 0.47 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM346496v1 |
| GenBank Assembly Accession | GCA_003464965.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003464965.1 [NCBI] |
| BioSample | SAMN09734224 [NCBI] |
| BioProject | PRJNA482748 [NCBI] |
| Submitter | BGI |
| Submission Date | 2018-07-29T08:47:06.967 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | QSAF01 |
| NCBI TaxID | 46506 |
| Isolation Source | feces |
| Geo Location | China: Shenzhen |
