Genome Meta Information: Aggregatibacter kilianii C2008001782 (GCA_003252805.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003252805.1 | ||
| HOMD Taxon-ID | HMT-426 | ||
| Species Name (in use by HOMD) | Aggregatibacter kilianii | ||
| Organism Name (as deposited) | HMT-426 Aggregatibacter kilianii C2008001782 | ||
| Strain or Isolate | C2008001782 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Aggregatibacter; s__Aggregatibacter kilianii |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 33.0x | ||
| Contigs |
|
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| Total Sequence Length | 2,329,796 (bp) | ||
| GC Percentage | 42.59 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/252/805/GCA_003252805.1_ASM325280v1 | ||
| CDS | 2090 | ||
| Genes | 2216 | ||
| mRNA | 2216 | ||
| misc RNA | 63 | ||
| rRNA | 10 | ||
| tRNA | 52 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 94.03 % | ||
| CheckM Completeness | 99.89 % | ||
| CheckM Contamination | 0.25 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.1 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM325280v1 |
| GenBank Assembly Accession | GCA_003252805.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003252805.1 [NCBI] |
| BioSample | SAMN09011131 [NCBI] |
| BioProject | PRJNA454666 [NCBI] |
| Submitter | Centers for Disease Control and Prevention |
| Submission Date | 2018-05-02T11:44:04.123 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | QEPX01 |
| NCBI TaxID | 732 |
| Isolation Source | Bronchial wash |
| Geo Location | USA: Minnesota |
