Genome Meta Information: Aggregatibacter kilianii PN_516 (GCA_003130305.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003130305.1 | ||
| HOMD Taxon-ID | HMT-426 | ||
| Species Name (in use by HOMD) | Aggregatibacter kilianii | ||
| Organism Name (as deposited) | HMT-426 Aggregatibacter kilianii PN_516 | ||
| Strain or Isolate | PN_516 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Aggregatibacter; s__Aggregatibacter kilianii |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 191.6x | ||
| Contigs |
|
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| Total Sequence Length | 2,367,815 (bp) | ||
| GC Percentage | 42.67 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/130/305/GCA_003130305.1_ASM313030v1 | ||
| CDS | 2146 | ||
| Genes | 2263 | ||
| mRNA | 2263 | ||
| misc RNA | 64 | ||
| rRNA | 4 | ||
| tRNA | 48 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.86 % | ||
| CheckM Completeness | 99.89 % | ||
| CheckM Contamination | 0.25 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.13 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM313030v1 |
| GenBank Assembly Accession | GCA_003130305.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003130305.1 [NCBI] |
| BioSample | SAMN07488455 [NCBI] |
| BioProject | PRJNA397823 [NCBI] |
| Submitter | Aarhus University |
| Submission Date | 2017-08-10T04:04:07.990 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | NRCP01 |
| NCBI TaxID | 2025884 |
| Isolation Source | Wound, finger |
| Geo Location | Denmark |
