Genome Meta Information: Actinomyces sp. HMT-897 F0631 (GCA_002999235.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002999235.1 | ||
| HOMD Taxon-ID | HMT-897 | ||
| Species Name (in use by HOMD) | Actinomyces sp. HMT-897 | ||
| Organism Name (as deposited) | HMT-897 Actinomyces sp. HMT-897 F0631 | ||
| Strain or Isolate | F0631 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces; s__Actinomyces sp002999235 |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 110.0x | ||
| Contigs |
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| Total Sequence Length | 3,249,416 (bp) | ||
| GC Percentage | 71.63 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/999/235/GCA_002999235.1_ASM299923v1 | ||
| CDS | 2468 | ||
| Genes | 2540 | ||
| mRNA | 2540 | ||
| misc RNA | 11 | ||
| rRNA | 6 | ||
| tRNA | 54 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.29 % | ||
| CheckM Contamination | 0.71 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.55 % | ||
| CRISPR-cas | 3 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM299923v1 |
| GenBank Assembly Accession | GCA_002999235.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002999235.1 [NCBI] |
| BioSample | SAMN08439033 [NCBI] |
| BioProject | PRJNA282954 [NCBI] |
| Submitter | The Forsyth Institute |
| Submission Date | 2018-01-30T17:19:05.086 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 2081702 |
| Isolation Source | Supragingival dental plaque |
| Geo Location | USA: Boston, MA |
