Genome Meta Information: Acidovorax ebreus LR2014-1 (GCA_002916785.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002916785.1 | ||
| HOMD Taxon-ID | HMT-209 | ||
| Species Name (in use by HOMD) | Acidovorax ebreus | ||
| Organism Name (as deposited) | HMT-209 Acidovorax ebreus LR2014-1 | ||
| Strain or Isolate | LR2014-1 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Diaphorobacter; s__Diaphorobacter nitroreducens |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 123.0x | ||
| Contigs |
|
||
| Total Sequence Length | 4,557,463 (bp) | ||
| GC Percentage | 66.01 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/916/785/GCA_002916785.1_ASM291678v1 | ||
| CDS | 4303 | ||
| Genes | 4406 | ||
| mRNA | 4406 | ||
| misc RNA | 34 | ||
| rRNA | 12 | ||
| tRNA | 56 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.98 % | ||
| CheckM Contamination | 0.23 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.33 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes (Beta) | No Pangenomes Available. | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM291678v1 |
| GenBank Assembly Accession | GCA_002916785.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002916785.1 [NCBI] |
| BioSample | SAMN06212360 [NCBI] |
| BioProject | PRJNA360566 [NCBI] |
| Submitter | Nanjing Agricultural University |
| Submission Date | 2017-01-09T05:24:03.013 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | MTBE01 |
| NCBI TaxID | 1933219 |
| Isolation Source | soil |
| Geo Location | China |
