Genome Meta Information: Corynebacterium striatum 2247 (GCA_002775105.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002775105.1 | ||
| HOMD Taxon-ID | HMT-072 | ||
| Species Name (in use by HOMD) | Corynebacterium striatum | ||
| Organism Name (as deposited) | HMT-072 Corynebacterium striatum 2247 | ||
| Strain or Isolate | 2247 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium striatum |
||
| Sequencing Technology | IonTorrent | ||
| Genome Coverage | 177.0x | ||
| Contigs |
|
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| Total Sequence Length | 2,875,402 (bp) | ||
| GC Percentage | 59.36 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/775/105/GCA_002775105.1_ASM277510v1 | ||
| CDS | 3017 | ||
| Genes | 3084 | ||
| mRNA | 3084 | ||
| misc RNA | 9 | ||
| rRNA | 7 | ||
| tRNA | 50 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.5 % | ||
| CheckM Completeness | 96.2 % | ||
| CheckM Contamination | 2.78 % | ||
| CheckM2 Completeness | 95.48 % | ||
| CheckM2 Contamination | 3.46 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM277510v1 |
| GenBank Assembly Accession | GCA_002775105.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_002775105.1 [NCBI] |
| BioSample | SAMN04517757 [NCBI] |
| BioProject | PRJNA313272 [NCBI] |
| Submitter | Universidade Federal do Para |
| Submission Date | 2016-02-26T09:57:02.000 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | LTBH01 |
| NCBI TaxID | 43770 |
| Isolation Source | NA |
| Geo Location | Brazil:Rio de Janeiro |
