Genome Meta Information: Anaerococcus nagyae UBA2626 (GCA_002359915.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_002359915.1 | ||
| HOMD Taxon-ID | HMT-792 | ||
| Species Name (in use by HOMD) | Anaerococcus nagyae | ||
| Organism Name (as deposited) | HMT-792 Anaerococcus nagyae UBA2626 | ||
| Strain or Isolate | UBA2626 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Tissierellales;f__Peptoniphilaceae;g__Anaerococcus; s__Anaerococcus nagyae |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 7.0x | ||
| Contigs |
|
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| Total Sequence Length | 1,670,242 (bp) | ||
| GC Percentage | 30.72 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/359/915/GCA_002359915.1_ASM235991v1 | ||
| CDS | 1751 | ||
| Genes | 1789 | ||
| mRNA | 1789 | ||
| misc RNA | 25 | ||
| rRNA | 1 | ||
| tRNA | 11 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 82.85 % | ||
| CheckM Contamination | 0.61 % | ||
| CheckM2 Completeness | 87.19 % | ||
| CheckM2 Contamination | 1.66 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM235991v1 |
| GenBank Assembly Accession | GCA_002359915.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | [NCBI] |
| BioSample | SAMN06452947 [NCBI] |
| BioProject | PRJNA348753 [NCBI] |
| Submitter | University of Queensland |
| Submission Date | 2017-02-27T11:09:55.320 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | DEOE01 |
| NCBI TaxID | 1946040 |
| Isolation Source | metal |
| Geo Location | USA:New York City |
