Genome Meta Information: Abiotrophia sp. HMT-427 HMSC24B09 (GCA_001815865.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001815865.1 | ||
| HOMD Taxon-ID | HMT-427 | ||
| Species Name (in use by HOMD) | Abiotrophia sp. HMT-427 | ||
| Organism Name (as deposited) | HMT-427 Abiotrophia sp. HMT-427 HMSC24B09 | ||
| Strain or Isolate | HMSC24B09 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Aerococcaceae;g__Abiotrophia; s__Abiotrophia sp001815865 |
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| Sequencing Technology | Illumina | ||
| Genome Coverage | 145.0x | ||
| Contigs |
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| Total Sequence Length | 2,020,784 (bp) | ||
| GC Percentage | 46.65 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/865/GCA_001815865.1_ASM181586v1 | ||
| CDS | 1837 | ||
| Genes | 1901 | ||
| mRNA | 1901 | ||
| misc RNA | 20 | ||
| rRNA | 3 | ||
| tRNA | 40 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 98.46 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 99.01 % | ||
| CheckM2 Contamination | 0.1 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP Site] | ||
| Pangenomes (Beta) |
View in Anvi`o:
Abiotrophia__sp_HMT_427__HMT_427
(Interactive)
View SVG Image |
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| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM181586v1 |
| GenBank Assembly Accession | GCA_001815865.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001815865.1 [NCBI] |
| BioSample | SAMN03436211 [NCBI] |
| BioProject | PRJNA269830 [NCBI] |
| Submitter | The Genome Institute at Washington University |
| Submission Date | 2015-03-20T18:05:07.547 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | LWPV01 |
| NCBI TaxID | 1581061 |
| Isolation Source | respiratory |
| Geo Location | |
