Genome Meta Information: Anaerolineae [G1] bacterium HMT-439 W11661 (GCA_001717545.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001717545.1 | ||
| HOMD Taxon-ID | HMT-439 | ||
| Species Name (in use by HOMD) | Anaerolineae [G1] bacterium HMT-439 | ||
| Organism Name (as deposited) | HMT-439 Anaerolineae [G1] bacterium HMT-439 W11661 | ||
| Strain or Isolate | W11661 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Anaerolineaceae;g__Flexilinea; s__Flexilinea sp001717545 |
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| Sequencing Technology | PacBio | ||
| Genome Coverage | 129.0x | ||
| Contigs |
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| Total Sequence Length | 2,945,494 (bp) | ||
| GC Percentage | 54.86 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/717/545/GCA_001717545.1_ASM171754v1 | ||
| CDS | 2536 | ||
| Genes | 2603 | ||
| mRNA | 2603 | ||
| misc RNA | 10 | ||
| rRNA | 6 | ||
| tRNA | 50 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 91.82 % | ||
| CheckM Contamination | 3.64 % | ||
| CheckM2 Completeness | 99.89 % | ||
| CheckM2 Contamination | 0.92 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP Site] | ||
| Pangenomes (Beta) |
View in Anvi`o:
Anaerolineae_G1__bacterium_HMT_439__HMT_439
(Interactive)
View SVG Image |
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| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM171754v1 |
| GenBank Assembly Accession | GCA_001717545.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001717545.1 [NCBI] |
| BioSample | SAMN05505093 [NCBI] |
| BioProject | PRJNA282954 [NCBI] |
| Submitter | The Forsyth Institute |
| Submission Date | 2016-08-02T12:06:24.936 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1889813 |
| Isolation Source | subgingival dental plaque |
| Geo Location | United Kingdom: London |
