Genome Meta Information: Streptococcus gordonii MB666 (GCA_001588985.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001588985.1 | ||
| HOMD Taxon-ID | HMT-622 | ||
| Species Name (in use by HOMD) | Streptococcus gordonii | ||
| Organism Name (as deposited) | HMT-622 Streptococcus gordonii MB666 | ||
| Strain or Isolate | MB666 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus gordonii |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 2000.0x | ||
| Contigs |
|
||
| Total Sequence Length | 2,307,982 (bp) | ||
| GC Percentage | 40.3 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/588/985/GCA_001588985.1_ASM158898v1 | ||
| CDS | 2215 | ||
| Genes | 2295 | ||
| mRNA | 2295 | ||
| misc RNA | 30 | ||
| rRNA | 3 | ||
| tRNA | 46 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.44 % | ||
| CheckM Completeness | 100 % | ||
| CheckM Contamination | 0.19 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.3 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM158898v1 |
| GenBank Assembly Accession | GCA_001588985.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001588985.1 [NCBI] |
| BioSample | SAMN03480688 [NCBI] |
| BioProject | PRJNA280679 [NCBI] |
| Submitter | University of Malaya |
| Submission Date | 2015-04-13T03:23:17.107 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | LAYG01 |
| NCBI TaxID | 1302 |
| Isolation Source | Subacute bacterial endocarditis |
| Geo Location | United Kingdom |
