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Genome Meta Information:
Streptococcus
gordonii
CCH8-G7 (GCA_001556605.1)
| HOMD Genome-ID |
GCA_001556605.1
|
| HOMD Taxon-ID |
HMT-622
|
| Species Name (in use by HOMD) |
Streptococcus gordonii
|
| Organism Name (as deposited) |
HMT-622 Streptococcus gordonii CCH8-G7
|
| Strain or Isolate |
CCH8-G7
|
GTDB (V)
Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;
s__Streptococcus gordonii |
| Sequencing Technology |
Illumina HiSeq
|
| Genome Coverage |
5.0x
|
| Contigs |
Number of Contigs: 121
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
1,978,194 (bp) |
| GC Percentage |
40.38
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/556/605/GCA_001556605.1_ASM155660v1
|
| CDS |
1873
|
| Genes |
1996
|
| mRNA |
1996
|
| misc RNA |
75
|
| rRNA |
6
|
| tRNA |
41
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
%
|
| CheckM Completeness |
86.52 %
|
| CheckM Contamination |
0 %
|
| CheckM2 Completeness |
90.09 %
|
| CheckM2 Contamination |
0.08 %
|
| CRISPR-cas |
1 Contig
[View]
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM155660v1
|
| GenBank Assembly Accession |
GCA_001556605.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_001556605.1
[NCBI]
|
| BioSample |
SAMN04299455
[NCBI]
|
| BioProject |
PRJNA299404
[NCBI]
|
| Submitter |
U.S. Environmental Protection Agency
|
| Submission Date |
2015-11-29T14:45:29.000
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
LSJE01
|
| NCBI TaxID |
1768771
|
| Isolation Source |
hospital shower hose biofilm
|
| Geo Location |
USA: Ohio
|
